Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.35■□□□□ 0.21
CopaQ8CIE6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CopaQ8CIE6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CopaQ8CIE6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CopaQ8CIE6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CopaQ8CIE6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CopaQ8CIE6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CopaQ8CIE6 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.35■□□□□ 0.21
CopaQ8CIE6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CopaQ8CIE6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CopaQ8CIE6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CopaQ8CIE6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CopaQ8CIE6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.35■□□□□ 0.21
CopaQ8CIE6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
CopaQ8CIE6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CopaQ8CIE6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.34■□□□□ 0.21
CopaQ8CIE6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Gm34391-201ENSMUST00000203706 907 ntBASIC16.34■□□□□ 0.21
CopaQ8CIE6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CopaQ8CIE6 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.34■□□□□ 0.21
CopaQ8CIE6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CopaQ8CIE6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CopaQ8CIE6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CopaQ8CIE6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CopaQ8CIE6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CopaQ8CIE6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CopaQ8CIE6 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CopaQ8CIE6 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
CopaQ8CIE6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CopaQ8CIE6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.33■□□□□ 0.2
CopaQ8CIE6 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CopaQ8CIE6 Gm29707-201ENSMUST00000196325 491 ntBASIC16.33■□□□□ 0.2
CopaQ8CIE6 Gm18421-201ENSMUST00000204122 625 ntBASIC16.33■□□□□ 0.2
CopaQ8CIE6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CopaQ8CIE6 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CopaQ8CIE6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CopaQ8CIE6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CopaQ8CIE6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.33■□□□□ 0.2
CopaQ8CIE6 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CopaQ8CIE6 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.33■□□□□ 0.2
CopaQ8CIE6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.33■□□□□ 0.2
CopaQ8CIE6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CopaQ8CIE6 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CopaQ8CIE6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CopaQ8CIE6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopaQ8CIE6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.32■□□□□ 0.2
CopaQ8CIE6 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.32■□□□□ 0.2
CopaQ8CIE6 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.32■□□□□ 0.2
CopaQ8CIE6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopaQ8CIE6 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CopaQ8CIE6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.31■□□□□ 0.2
CopaQ8CIE6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.31■□□□□ 0.2
CopaQ8CIE6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopaQ8CIE6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CopaQ8CIE6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopaQ8CIE6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopaQ8CIE6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopaQ8CIE6 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CopaQ8CIE6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.31■□□□□ 0.2
CopaQ8CIE6 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.31■□□□□ 0.2
CopaQ8CIE6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopaQ8CIE6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CopaQ8CIE6 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms