Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Polr2bQ8CFI7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Gm43347-201ENSMUST00000200226 580 ntBASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Polr2bQ8CFI7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 Gm27459-201ENSMUST00000184860 107 ntBASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Polr2bQ8CFI7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Polr2bQ8CFI7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Polr2bQ8CFI7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Polr2bQ8CFI7 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Gm25745-201ENSMUST00000174945 133 ntBASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Polr2bQ8CFI7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms