Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim52Q8CDV4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim52Q8CDV4 Gm25925-201ENSMUST00000158314 306 ntBASIC19.7■□□□□ 0.74
Trim52Q8CDV4 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trim52Q8CDV4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim52Q8CDV4 AC174742.1-201ENSMUST00000218272 304 ntBASIC19.7■□□□□ 0.74
Trim52Q8CDV4 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.7■□□□□ 0.74
Trim52Q8CDV4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim52Q8CDV4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim52Q8CDV4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim52Q8CDV4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trim52Q8CDV4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim52Q8CDV4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim52Q8CDV4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim52Q8CDV4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim52Q8CDV4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim52Q8CDV4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim52Q8CDV4 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim52Q8CDV4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC19.7■□□□□ 0.74
Trim52Q8CDV4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim52Q8CDV4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Gm14822-201ENSMUST00000122247 291 ntBASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Gm27397-201ENSMUST00000184997 107 ntBASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.68■□□□□ 0.74
Trim52Q8CDV4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
Trim52Q8CDV4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 H2af-ps-201ENSMUST00000119066 295 ntBASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim52Q8CDV4 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim52Q8CDV4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms