Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Gm10013-201ENSMUST00000106074 672 ntBASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Gm10052-201ENSMUST00000168019 960 ntBASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Gm7729-201ENSMUST00000050143 801 ntBASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc38Q8CDN8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Mir770-201ENSMUST00000103252 94 ntBASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Gm10231-201ENSMUST00000181584 441 ntBASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Gm10175-202ENSMUST00000208752 441 ntBASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Ccdc38Q8CDN8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc38Q8CDN8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Gm9013-201ENSMUST00000132939 882 ntBASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.78■□□□□ 0.44
Ccdc38Q8CDN8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms