Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Gm6345-202ENSMUST00000180900 204 ntBASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Gm21559-201ENSMUST00000220638 855 ntBASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Gm8587-201ENSMUST00000076538 843 ntBASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vcpip1Q8CDG3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.22■□□□□ 0.35
Vcpip1Q8CDG3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vcpip1Q8CDG3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.34
Vcpip1Q8CDG3 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.21■□□□□ 0.34
Vcpip1Q8CDG3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Vcpip1Q8CDG3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.21■□□□□ 0.34
Vcpip1Q8CDG3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Gm22697-201ENSMUST00000175194 63 ntBASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Gm18032-201ENSMUST00000222541 538 ntBASIC17.2■□□□□ 0.34
Vcpip1Q8CDG3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 113.4 ms