Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Prpf31Q8CCF0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Prpf31Q8CCF0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Prpf31Q8CCF0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Prpf31Q8CCF0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Gm4535-201ENSMUST00000182274 558 ntBASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Gm8655-201ENSMUST00000221159 852 ntBASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Gm10355-201ENSMUST00000097146 517 ntBASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Prpf31Q8CCF0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 Gm8097-201ENSMUST00000117903 829 ntBASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 Gm13418-201ENSMUST00000119097 944 ntBASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Prpf31Q8CCF0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf31Q8CCF0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf31Q8CCF0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf31Q8CCF0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf31Q8CCF0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf31Q8CCF0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf31Q8CCF0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Prpf31Q8CCF0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms