Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
E4f1Q8CCE9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
E4f1Q8CCE9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
E4f1Q8CCE9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
E4f1Q8CCE9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
E4f1Q8CCE9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.82■□□□□ 0.6
E4f1Q8CCE9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
E4f1Q8CCE9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.81■□□□□ 0.6
E4f1Q8CCE9 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E4f1Q8CCE9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Gm27525-201ENSMUST00000184465 107 ntBASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Gm27867-201ENSMUST00000184778 125 ntBASIC18.8■□□□□ 0.6
E4f1Q8CCE9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Gm18206-201ENSMUST00000207027 926 ntBASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Gm6296-201ENSMUST00000222599 943 ntBASIC18.8■□□□□ 0.6
E4f1Q8CCE9 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
E4f1Q8CCE9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Gm2651-201ENSMUST00000203560 838 ntBASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Gm6376-201ENSMUST00000209407 580 ntBASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Prob1-201ENSMUST00000097619 3021 ntBASIC18.79■□□□□ 0.6
E4f1Q8CCE9 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
E4f1Q8CCE9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
E4f1Q8CCE9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
E4f1Q8CCE9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
E4f1Q8CCE9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
E4f1Q8CCE9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.78■□□□□ 0.6
E4f1Q8CCE9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
E4f1Q8CCE9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
E4f1Q8CCE9 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
E4f1Q8CCE9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
E4f1Q8CCE9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
E4f1Q8CCE9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
E4f1Q8CCE9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
E4f1Q8CCE9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
E4f1Q8CCE9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
E4f1Q8CCE9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
E4f1Q8CCE9 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
E4f1Q8CCE9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms