Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lysmd4Q8CC84 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Gm29707-201ENSMUST00000196325 491 ntBASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lysmd4Q8CC84 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 AC153881.1-201ENSMUST00000214448 284 ntBASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lysmd4Q8CC84 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 Gm7370-201ENSMUST00000219471 767 ntBASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Lysmd4Q8CC84 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms