Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Slc46a2Q8CA03 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Slc46a2Q8CA03 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 BC037039-201ENSMUST00000192003 2205 ntBASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Odf3b-204ENSMUST00000227834 930 ntBASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Slc46a2Q8CA03 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Mir1199-201ENSMUST00000117015 119 ntBASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Slc46a2Q8CA03 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc46a2Q8CA03 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Slc46a2Q8CA03 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Slc46a2Q8CA03 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Slc46a2Q8CA03 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc46a2Q8CA03 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc46a2Q8CA03 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc46a2Q8CA03 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.37■□□□□ 0.05
Slc46a2Q8CA03 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Slc46a2Q8CA03 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Slc46a2Q8CA03 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.37■□□□□ 0.05
Slc46a2Q8CA03 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms