Protein–RNA interactions for Protein: Q8C5U9

Ubqln3, Ubiquilin-3, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln3Q8C5U9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Mir770-201ENSMUST00000103252 94 ntBASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ubqln3Q8C5U9 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.08□□□□□ -0.15
Ubqln3Q8C5U9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ubqln3Q8C5U9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Gm29518-201ENSMUST00000190858 372 ntBASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Gm7367-201ENSMUST00000057611 492 ntBASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Ubqln3Q8C5U9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubqln3Q8C5U9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubqln3Q8C5U9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubqln3Q8C5U9 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ubqln3Q8C5U9 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ubqln3Q8C5U9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.06□□□□□ -0.16
Ubqln3Q8C5U9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubqln3Q8C5U9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ubqln3Q8C5U9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubqln3Q8C5U9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.06□□□□□ -0.16
Ubqln3Q8C5U9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubqln3Q8C5U9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.06□□□□□ -0.16
Ubqln3Q8C5U9 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ubqln3Q8C5U9 Gm14859-201ENSMUST00000117752 357 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms