Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc60Q8C4J0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc60Q8C4J0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc60Q8C4J0 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc60Q8C4J0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc60Q8C4J0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc60Q8C4J0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc60Q8C4J0 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc60Q8C4J0 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc60Q8C4J0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc60Q8C4J0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc60Q8C4J0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc60Q8C4J0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.39■□□□□ 0.85
Ccdc60Q8C4J0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC20.39■□□□□ 0.85
Ccdc60Q8C4J0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc60Q8C4J0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc60Q8C4J0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ccdc60Q8C4J0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc60Q8C4J0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Ccdc60Q8C4J0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc60Q8C4J0 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc60Q8C4J0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc60Q8C4J0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc60Q8C4J0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Ccdc60Q8C4J0 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc60Q8C4J0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Gm25406-201ENSMUST00000157599 105 ntBASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC20.38■□□□□ 0.85
Ccdc60Q8C4J0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc60Q8C4J0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms