Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rft1Q8C3B8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Gm16061-201ENSMUST00000122167 857 ntBASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rft1Q8C3B8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Gm13474-201ENSMUST00000122466 815 ntBASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rft1Q8C3B8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Gm18958-201ENSMUST00000174258 762 ntBASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Gm7977-201ENSMUST00000193787 748 ntBASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rft1Q8C3B8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rft1Q8C3B8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms