Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 AC140397.2-201ENSMUST00000224213 834 ntBASIC21.42■■□□□ 1.02
Cps1Q8C196 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cps1Q8C196 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cps1Q8C196 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cps1Q8C196 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cps1Q8C196 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Cps1Q8C196 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cps1Q8C196 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cps1Q8C196 Fgf17-202ENSMUST00000227123 1336 ntBASIC21.42■■□□□ 1.02
Cps1Q8C196 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cps1Q8C196 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC21.41■■□□□ 1.02
Cps1Q8C196 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cps1Q8C196 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Cps1Q8C196 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC21.41■■□□□ 1.02
Cps1Q8C196 Gm10253-201ENSMUST00000194270 940 ntBASIC21.41■■□□□ 1.02
Cps1Q8C196 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC21.41■■□□□ 1.02
Cps1Q8C196 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Cps1Q8C196 AC126250.1-201ENSMUST00000228343 1768 ntBASIC21.41■■□□□ 1.02
Cps1Q8C196 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Cps1Q8C196 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cps1Q8C196 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cps1Q8C196 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cps1Q8C196 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cps1Q8C196 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cps1Q8C196 Gm9385-201ENSMUST00000117563 472 ntBASIC21.4■■□□□ 1.02
Cps1Q8C196 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cps1Q8C196 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cps1Q8C196 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cps1Q8C196 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Cps1Q8C196 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cps1Q8C196 Haglr-201ENSMUST00000100000 2085 ntBASIC21.4■■□□□ 1.02
Cps1Q8C196 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Cps1Q8C196 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cps1Q8C196 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cps1Q8C196 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cps1Q8C196 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cps1Q8C196 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cps1Q8C196 Rbfox2-206ENSMUST00000227314 1810 ntBASIC21.4■■□□□ 1.02
Cps1Q8C196 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC21.39■■□□□ 1.02
Cps1Q8C196 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Cps1Q8C196 Gm5186-201ENSMUST00000218781 920 ntBASIC21.39■■□□□ 1.02
Cps1Q8C196 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cps1Q8C196 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cps1Q8C196 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC21.39■■□□□ 1.01
Cps1Q8C196 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC21.39■■□□□ 1.01
Cps1Q8C196 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cps1Q8C196 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cps1Q8C196 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cps1Q8C196 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC21.39■■□□□ 1.01
Cps1Q8C196 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC21.39■■□□□ 1.01
Cps1Q8C196 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cps1Q8C196 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC21.39■■□□□ 1.01
Cps1Q8C196 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Cps1Q8C196 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Cps1Q8C196 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cps1Q8C196 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cps1Q8C196 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 Gm22175-201ENSMUST00000175007 78 ntBASIC21.38■■□□□ 1.01
Cps1Q8C196 Gm8318-201ENSMUST00000182954 872 ntBASIC21.38■■□□□ 1.01
Cps1Q8C196 CT025555.1-201ENSMUST00000225901 1217 ntBASIC21.38■■□□□ 1.01
Cps1Q8C196 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC21.38■■□□□ 1.01
Cps1Q8C196 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 AC115863.1-201ENSMUST00000214815 1813 ntBASIC21.38■■□□□ 1.01
Cps1Q8C196 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Cps1Q8C196 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC21.38■■□□□ 1.01
Cps1Q8C196 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cps1Q8C196 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
Cps1Q8C196 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cps1Q8C196 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cps1Q8C196 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cps1Q8C196 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cps1Q8C196 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cps1Q8C196 Gm7774-201ENSMUST00000200064 533 ntBASIC21.37■■□□□ 1.01
Cps1Q8C196 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC21.37■■□□□ 1.01
Cps1Q8C196 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cps1Q8C196 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Cps1Q8C196 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cps1Q8C196 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cps1Q8C196 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Cps1Q8C196 Prkcz2-201ENSMUST00000206136 1756 ntBASIC21.37■■□□□ 1.01
Cps1Q8C196 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cps1Q8C196 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC21.37■■□□□ 1.01
Cps1Q8C196 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cps1Q8C196 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cps1Q8C196 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms