Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3rf3Q8C120 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sh3rf3Q8C120 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Olfr129-201ENSMUST00000122318 993 ntBASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sh3rf3Q8C120 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Gm45328-201ENSMUST00000210942 917 ntBASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.67■□□□□ 0.26
Sh3rf3Q8C120 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf3Q8C120 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf3Q8C120 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf3Q8C120 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.66■□□□□ 0.26
Sh3rf3Q8C120 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf3Q8C120 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf3Q8C120 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf3Q8C120 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sh3rf3Q8C120 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms