Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trerf1Q8BXJ2 Gm44450-201ENSMUST00000199528 114 ntBASIC16.91■□□□□ 0.3
Trerf1Q8BXJ2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trerf1Q8BXJ2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trerf1Q8BXJ2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trerf1Q8BXJ2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trerf1Q8BXJ2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trerf1Q8BXJ2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trerf1Q8BXJ2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trerf1Q8BXJ2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trerf1Q8BXJ2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trerf1Q8BXJ2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Trerf1Q8BXJ2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trerf1Q8BXJ2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trerf1Q8BXJ2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Trerf1Q8BXJ2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Gm21362-201ENSMUST00000194272 928 ntBASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trerf1Q8BXJ2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trerf1Q8BXJ2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Gm18421-201ENSMUST00000204122 625 ntBASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Gm7367-201ENSMUST00000057611 492 ntBASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.87■□□□□ 0.29
Trerf1Q8BXJ2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms