Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Gm18669-201ENSMUST00000216049 778 ntBASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ube3dQ8BX13 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Mir3081-201ENSMUST00000175305 84 ntBASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Gm28033-201ENSMUST00000184224 96 ntBASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Gm27741-201ENSMUST00000185060 237 ntBASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ube3dQ8BX13 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.21□□□□□ -0.13
Ube3dQ8BX13 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms