Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cpsf7Q8BTV2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.06■□□□□ 0.16
Cpsf7Q8BTV2 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.06■□□□□ 0.16
Cpsf7Q8BTV2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.06■□□□□ 0.16
Cpsf7Q8BTV2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Cpsf7Q8BTV2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf7Q8BTV2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf7Q8BTV2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf7Q8BTV2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf7Q8BTV2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf7Q8BTV2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf7Q8BTV2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf7Q8BTV2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cpsf7Q8BTV2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cpsf7Q8BTV2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cpsf7Q8BTV2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Gm18421-201ENSMUST00000204122 625 ntBASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 BC037039-201ENSMUST00000192003 2205 ntBASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Cpsf7Q8BTV2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Timm23-208ENSMUST00000226683 750 ntBASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cpsf7Q8BTV2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf7Q8BTV2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf7Q8BTV2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cpsf7Q8BTV2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms