Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Cpne3Q8BT60 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Mir6982-201ENSMUST00000184354 68 ntBASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.49■□□□□ 0.07
Cpne3Q8BT60 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpne3Q8BT60 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Gm27389-201ENSMUST00000183622 195 ntBASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cpne3Q8BT60 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Cpne3Q8BT60 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms