Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rd3Q8BRE0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rd3Q8BRE0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rd3Q8BRE0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rd3Q8BRE0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rd3Q8BRE0 Gm14140-201ENSMUST00000119999 995 ntBASIC16.95■□□□□ 0.3
Rd3Q8BRE0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Rd3Q8BRE0 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rd3Q8BRE0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rd3Q8BRE0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rd3Q8BRE0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rd3Q8BRE0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rd3Q8BRE0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Gm27702-201ENSMUST00000184512 56 ntBASIC16.94■□□□□ 0.3
Rd3Q8BRE0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.94■□□□□ 0.3
Rd3Q8BRE0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rd3Q8BRE0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm14494-201ENSMUST00000118786 435 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm8825-201ENSMUST00000182565 998 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm4518-201ENSMUST00000182638 718 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm18622-201ENSMUST00000219361 595 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rd3Q8BRE0 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rd3Q8BRE0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms