Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col16a1Q8BLX7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col16a1Q8BLX7 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Gm18246-201ENSMUST00000221023 728 ntBASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 AC140397.2-201ENSMUST00000224213 834 ntBASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
Col16a1Q8BLX7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Rprl2-201ENSMUST00000157150 290 ntBASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col16a1Q8BLX7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.83■□□□□ 0.93
Col16a1Q8BLX7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Col16a1Q8BLX7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Col16a1Q8BLX7 Haglr-201ENSMUST00000100000 2085 ntBASIC20.83■□□□□ 0.93
Col16a1Q8BLX7 CT025626.1-201ENSMUST00000223735 1455 ntBASIC20.83■□□□□ 0.93
Col16a1Q8BLX7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Col16a1Q8BLX7 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col16a1Q8BLX7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm22065-201ENSMUST00000103753 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm22066-201ENSMUST00000103761 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm24932-201ENSMUST00000103763 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm24115-201ENSMUST00000103799 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm22190-201ENSMUST00000103827 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm22191-201ENSMUST00000103831 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm24721-201ENSMUST00000103849 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm28018-201ENSMUST00000103869 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm26399-201ENSMUST00000103937 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm25349-201ENSMUST00000177728 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm23616-201ENSMUST00000177797 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm25871-201ENSMUST00000177816 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm24752-201ENSMUST00000178240 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm24496-201ENSMUST00000178287 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm25649-201ENSMUST00000178476 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm25548-201ENSMUST00000178681 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm23147-201ENSMUST00000178841 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm26095-201ENSMUST00000179270 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm22171-201ENSMUST00000179283 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm23936-201ENSMUST00000179354 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm22619-201ENSMUST00000179516 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm25255-201ENSMUST00000179579 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm24755-201ENSMUST00000179691 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm26506-201ENSMUST00000179692 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm25086-201ENSMUST00000179931 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm23243-201ENSMUST00000180047 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm24659-201ENSMUST00000180212 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm24169-201ENSMUST00000180244 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm23689-201ENSMUST00000180354 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm27359-201ENSMUST00000184153 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm27785-201ENSMUST00000184268 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm27466-201ENSMUST00000184396 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Gm27703-201ENSMUST00000184836 110 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 AC126408.1-201ENSMUST00000225184 523 ntBASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col16a1Q8BLX7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Col16a1Q8BLX7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col16a1Q8BLX7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col16a1Q8BLX7 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms