Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccdc40Q8BI79 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Gm10013-201ENSMUST00000106074 672 ntBASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccdc40Q8BI79 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Gm11355-201ENSMUST00000121120 306 ntBASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Gm37722-201ENSMUST00000193757 208 ntBASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ccdc40Q8BI79 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ccdc40Q8BI79 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ccdc40Q8BI79 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 AC115863.1-201ENSMUST00000214815 1813 ntBASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc40Q8BI79 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc40Q8BI79 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc40Q8BI79 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc40Q8BI79 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc40Q8BI79 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Ccdc40Q8BI79 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc40Q8BI79 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.69■□□□□ 0.26
Ccdc40Q8BI79 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.69■□□□□ 0.26
Ccdc40Q8BI79 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc40Q8BI79 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.69■□□□□ 0.26
Ccdc40Q8BI79 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc40Q8BI79 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc40Q8BI79 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc40Q8BI79 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc40Q8BI79 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc40Q8BI79 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms