Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Clrn3Q8BHH8 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Clrn3Q8BHH8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Clrn3Q8BHH8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Clrn3Q8BHH8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.05■□□□□ -0
Clrn3Q8BHH8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Clrn3Q8BHH8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.05■□□□□ -0
Clrn3Q8BHH8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Clrn3Q8BHH8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Clrn3Q8BHH8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Clrn3Q8BHH8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.05■□□□□ -0
Clrn3Q8BHH8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Clrn3Q8BHH8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Clrn3Q8BHH8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.04■□□□□ -0
Clrn3Q8BHH8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Mir770-201ENSMUST00000103252 94 ntBASIC15.04■□□□□ -0
Clrn3Q8BHH8 Gm6623-201ENSMUST00000173570 544 ntBASIC15.04■□□□□ -0
Clrn3Q8BHH8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clrn3Q8BHH8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Clrn3Q8BHH8 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Clrn3Q8BHH8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.03■□□□□ -0
Clrn3Q8BHH8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.03■□□□□ -0
Clrn3Q8BHH8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.03■□□□□ -0
Clrn3Q8BHH8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clrn3Q8BHH8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.03■□□□□ -0
Clrn3Q8BHH8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Clrn3Q8BHH8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn3Q8BHH8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn3Q8BHH8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn3Q8BHH8 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.02■□□□□ -0
Clrn3Q8BHH8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn3Q8BHH8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clrn3Q8BHH8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn3Q8BHH8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn3Q8BHH8 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.02■□□□□ -0
Clrn3Q8BHH8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn3Q8BHH8 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.02■□□□□ -0
Clrn3Q8BHH8 Gm10052-201ENSMUST00000168019 960 ntBASIC15.02■□□□□ -0
Clrn3Q8BHH8 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.02■□□□□ -0
Clrn3Q8BHH8 Gm45328-201ENSMUST00000210942 917 ntBASIC15.02■□□□□ -0
Clrn3Q8BHH8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn3Q8BHH8 Gm7729-201ENSMUST00000050143 801 ntBASIC15.02■□□□□ -0
Clrn3Q8BHH8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Clrn3Q8BHH8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clrn3Q8BHH8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Clrn3Q8BHH8 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clrn3Q8BHH8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.02□□□□□ -0.01
Clrn3Q8BHH8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clrn3Q8BHH8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Clrn3Q8BHH8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
Clrn3Q8BHH8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clrn3Q8BHH8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clrn3Q8BHH8 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.02□□□□□ -0.01
Clrn3Q8BHH8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Clrn3Q8BHH8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Clrn3Q8BHH8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn3Q8BHH8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn3Q8BHH8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn3Q8BHH8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn3Q8BHH8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn3Q8BHH8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.01□□□□□ -0.01
Clrn3Q8BHH8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn3Q8BHH8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn3Q8BHH8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Clrn3Q8BHH8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Clrn3Q8BHH8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Clrn3Q8BHH8 Gm11950-201ENSMUST00000121615 838 ntBASIC15.01□□□□□ -0.01
Clrn3Q8BHH8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms