Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Slc5a7Q8BGY9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Slc5a7Q8BGY9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Slc5a7Q8BGY9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Slc5a7Q8BGY9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Slc5a7Q8BGY9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.08□□□□□ -0.15
Slc5a7Q8BGY9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Slc5a7Q8BGY9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Slc5a7Q8BGY9 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.08□□□□□ -0.15
Slc5a7Q8BGY9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Slc5a7Q8BGY9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Il3ra-202ENSMUST00000223589 738 ntBASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Slc5a7Q8BGY9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.06□□□□□ -0.16
Slc5a7Q8BGY9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Slc5a7Q8BGY9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms