Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trnp1Q80ZI1 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Mir449b-201ENSMUST00000104833 80 ntBASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Gm22175-201ENSMUST00000175007 78 ntBASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 AC158538.2-201ENSMUST00000225455 906 ntBASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trnp1Q80ZI1 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Gm6257-201ENSMUST00000163864 910 ntBASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Trnp1Q80ZI1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
Trnp1Q80ZI1 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Trnp1Q80ZI1 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trnp1Q80ZI1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trnp1Q80ZI1 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trnp1Q80ZI1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.46
Trnp1Q80ZI1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnp1Q80ZI1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnp1Q80ZI1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnp1Q80ZI1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnp1Q80ZI1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.95■□□□□ 0.46
Trnp1Q80ZI1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.95■□□□□ 0.46
Trnp1Q80ZI1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trnp1Q80ZI1 Rpph1-201ENSMUST00000175096 319 ntBASIC17.95■□□□□ 0.46
Trnp1Q80ZI1 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.95■□□□□ 0.46
Trnp1Q80ZI1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trnp1Q80ZI1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnp1Q80ZI1 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trnp1Q80ZI1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnp1Q80ZI1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnp1Q80ZI1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnp1Q80ZI1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trnp1Q80ZI1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Trnp1Q80ZI1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.94■□□□□ 0.46
Trnp1Q80ZI1 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.94■□□□□ 0.46
Trnp1Q80ZI1 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trnp1Q80ZI1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trnp1Q80ZI1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Trnp1Q80ZI1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trnp1Q80ZI1 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trnp1Q80ZI1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Trnp1Q80ZI1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Trnp1Q80ZI1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trnp1Q80ZI1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trnp1Q80ZI1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms