Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Gm5867-201ENSMUST00000063197 592 ntBASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rnf168Q80XJ2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.03■□□□□ 0.32
Rnf168Q80XJ2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Gm1401-201ENSMUST00000122048 772 ntBASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Gm27525-201ENSMUST00000184465 107 ntBASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Gm36967-201ENSMUST00000193814 266 ntBASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rnf168Q80XJ2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf168Q80XJ2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf168Q80XJ2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf168Q80XJ2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf168Q80XJ2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf168Q80XJ2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf168Q80XJ2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf168Q80XJ2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rnf168Q80XJ2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 Gm7507-201ENSMUST00000183053 1008 ntBASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rnf168Q80XJ2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms