Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
Rpap1Q80TE0 Gm15635-204ENSMUST00000208024 2539 ntBASIC24.66■■□□□ 1.54
Rpap1Q80TE0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rpap1Q80TE0 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rpap1Q80TE0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Rpap1Q80TE0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Rpap1Q80TE0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
Rpap1Q80TE0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rpap1Q80TE0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC24.66■■□□□ 1.54
Rpap1Q80TE0 Thap2-203ENSMUST00000218989 527 ntBASIC24.66■■□□□ 1.54
Rpap1Q80TE0 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Rpap1Q80TE0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Rpap1Q80TE0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rpap1Q80TE0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Rpap1Q80TE0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Gm43294-201ENSMUST00000202850 2490 ntBASIC24.65■■□□□ 1.54
Rpap1Q80TE0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Rpap1Q80TE0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Rpap1Q80TE0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Rpap1Q80TE0 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Rpap1Q80TE0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Rpap1Q80TE0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Rpap1Q80TE0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Rpap1Q80TE0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC24.64■■□□□ 1.53
Rpap1Q80TE0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Rpap1Q80TE0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC24.63■■□□□ 1.53
Rpap1Q80TE0 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Rpap1Q80TE0 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rpap1Q80TE0 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Rpap1Q80TE0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC24.63■■□□□ 1.53
Rpap1Q80TE0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC24.63■■□□□ 1.53
Rpap1Q80TE0 Gm18889-201ENSMUST00000174284 929 ntBASIC24.63■■□□□ 1.53
Rpap1Q80TE0 Gm5628-201ENSMUST00000222318 1049 ntBASIC24.63■■□□□ 1.53
Rpap1Q80TE0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC24.63■■□□□ 1.53
Rpap1Q80TE0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Rpap1Q80TE0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rpap1Q80TE0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rpap1Q80TE0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rpap1Q80TE0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rpap1Q80TE0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rpap1Q80TE0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Rpap1Q80TE0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
Rpap1Q80TE0 Fgf17-202ENSMUST00000227123 1336 ntBASIC24.62■■□□□ 1.53
Rpap1Q80TE0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rpap1Q80TE0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rpap1Q80TE0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Rpap1Q80TE0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC24.62■■□□□ 1.53
Rpap1Q80TE0 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rpap1Q80TE0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Rpap1Q80TE0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Rpap1Q80TE0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Rpap1Q80TE0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rpap1Q80TE0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC24.62■■□□□ 1.53
Rpap1Q80TE0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rpap1Q80TE0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Rpap1Q80TE0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Rpap1Q80TE0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC24.61■■□□□ 1.53
Rpap1Q80TE0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Rpap1Q80TE0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Rpap1Q80TE0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rpap1Q80TE0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Rpap1Q80TE0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rpap1Q80TE0 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Rpap1Q80TE0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
Rpap1Q80TE0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Rpap1Q80TE0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC24.61■■□□□ 1.53
Rpap1Q80TE0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rpap1Q80TE0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC24.6■■□□□ 1.53
Rpap1Q80TE0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
Rpap1Q80TE0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rpap1Q80TE0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rpap1Q80TE0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Rpap1Q80TE0 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rpap1Q80TE0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rpap1Q80TE0 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
Rpap1Q80TE0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Rpap1Q80TE0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rpap1Q80TE0 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC24.6■■□□□ 1.53
Rpap1Q80TE0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Rpap1Q80TE0 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rpap1Q80TE0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Rpap1Q80TE0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rpap1Q80TE0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms