Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Gm14140-201ENSMUST00000119999 995 ntBASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Gm44872-201ENSMUST00000207864 420 ntBASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf38bQ80SY5 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Gm15165-201ENSMUST00000118140 502 ntBASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Gm11336-201ENSMUST00000118168 334 ntBASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Prpf38bQ80SY5 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Gm7230-201ENSMUST00000173026 815 ntBASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prpf38bQ80SY5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Gm43438-201ENSMUST00000198133 379 ntBASIC16.67■□□□□ 0.26
Prpf38bQ80SY5 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms