Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf139Q7TMV1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rnf139Q7TMV1 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.11■□□□□ 0.33
Rnf139Q7TMV1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rnf139Q7TMV1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rnf139Q7TMV1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf139Q7TMV1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
Rnf139Q7TMV1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf139Q7TMV1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf139Q7TMV1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf139Q7TMV1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.08■□□□□ 0.33
Rnf139Q7TMV1 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf139Q7TMV1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rnf139Q7TMV1 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms