Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cspg5Q71M36 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cspg5Q71M36 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Cspg5Q71M36 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Cspg5Q71M36 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Cspg5Q71M36 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Cspg5Q71M36 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cspg5Q71M36 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cspg5Q71M36 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cspg5Q71M36 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Cspg5Q71M36 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cspg5Q71M36 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.58■□□□□ 0.24
Cspg5Q71M36 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.58■□□□□ 0.24
Cspg5Q71M36 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.58■□□□□ 0.24
Cspg5Q71M36 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.58■□□□□ 0.24
Cspg5Q71M36 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cspg5Q71M36 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cspg5Q71M36 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cspg5Q71M36 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.58■□□□□ 0.24
Cspg5Q71M36 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cspg5Q71M36 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cspg5Q71M36 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cspg5Q71M36 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cspg5Q71M36 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Cspg5Q71M36 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Gm27702-201ENSMUST00000184512 56 ntBASIC16.57■□□□□ 0.24
Cspg5Q71M36 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.57■□□□□ 0.24
Cspg5Q71M36 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.57■□□□□ 0.24
Cspg5Q71M36 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cspg5Q71M36 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.56■□□□□ 0.24
Cspg5Q71M36 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Gm5264-201ENSMUST00000190584 848 ntBASIC16.56■□□□□ 0.24
Cspg5Q71M36 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.56■□□□□ 0.24
Cspg5Q71M36 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cspg5Q71M36 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Gm12350-201ENSMUST00000121208 462 ntBASIC16.55■□□□□ 0.24
Cspg5Q71M36 Gm25745-201ENSMUST00000174945 133 ntBASIC16.55■□□□□ 0.24
Cspg5Q71M36 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cspg5Q71M36 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms