Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Rif1Q6PR54 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.47□□□□□ -0.25
Rif1Q6PR54 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Gm25406-201ENSMUST00000157599 105 ntBASIC13.47□□□□□ -0.25
Rif1Q6PR54 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.47□□□□□ -0.25
Rif1Q6PR54 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.47□□□□□ -0.25
Rif1Q6PR54 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Gm12176-201ENSMUST00000121420 875 ntBASIC13.47□□□□□ -0.25
Rif1Q6PR54 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Rif1Q6PR54 Gm16570-201ENSMUST00000161951 436 ntBASIC13.47□□□□□ -0.25
Rif1Q6PR54 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rif1Q6PR54 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rif1Q6PR54 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rif1Q6PR54 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.46□□□□□ -0.25
Rif1Q6PR54 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.46□□□□□ -0.25
Rif1Q6PR54 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rif1Q6PR54 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rif1Q6PR54 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Rif1Q6PR54 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Rif1Q6PR54 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.46□□□□□ -0.25
Rif1Q6PR54 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
Rif1Q6PR54 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rif1Q6PR54 Mir7684-201ENSMUST00000183858 60 ntBASIC13.46□□□□□ -0.25
Rif1Q6PR54 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.46□□□□□ -0.25
Rif1Q6PR54 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rif1Q6PR54 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rif1Q6PR54 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rif1Q6PR54 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Rif1Q6PR54 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rif1Q6PR54 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rif1Q6PR54 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Rif1Q6PR54 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rif1Q6PR54 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rif1Q6PR54 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rif1Q6PR54 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rif1Q6PR54 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rif1Q6PR54 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Rif1Q6PR54 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rif1Q6PR54 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rif1Q6PR54 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.45□□□□□ -0.26
Rif1Q6PR54 Gm20553-201ENSMUST00000204205 844 ntBASIC13.45□□□□□ -0.26
Rif1Q6PR54 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.45□□□□□ -0.26
Rif1Q6PR54 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.45□□□□□ -0.26
Rif1Q6PR54 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rif1Q6PR54 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.45□□□□□ -0.26
Rif1Q6PR54 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rif1Q6PR54 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.45□□□□□ -0.26
Rif1Q6PR54 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rif1Q6PR54 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rif1Q6PR54 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rif1Q6PR54 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rif1Q6PR54 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rif1Q6PR54 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Rif1Q6PR54 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.45□□□□□ -0.26
Rif1Q6PR54 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.45□□□□□ -0.26
Rif1Q6PR54 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rif1Q6PR54 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rif1Q6PR54 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rif1Q6PR54 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rif1Q6PR54 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
Rif1Q6PR54 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Gm18057-201ENSMUST00000208220 503 ntBASIC13.44□□□□□ -0.26
Rif1Q6PR54 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.44□□□□□ -0.26
Rif1Q6PR54 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Rif1Q6PR54 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms