Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.68■□□□□ 0.58
Smarcc2Q6PDG5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc2Q6PDG5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc2Q6PDG5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Smarcc2Q6PDG5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Gm28033-201ENSMUST00000184224 96 ntBASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Smarcc2Q6PDG5 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Smarcc2Q6PDG5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc2Q6PDG5 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.65■□□□□ 0.58
Smarcc2Q6PDG5 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.65■□□□□ 0.58
Smarcc2Q6PDG5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.65■□□□□ 0.58
Smarcc2Q6PDG5 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc2Q6PDG5 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Smarcc2Q6PDG5 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc2Q6PDG5 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc2Q6PDG5 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc2Q6PDG5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc2Q6PDG5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc2Q6PDG5 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc2Q6PDG5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc2Q6PDG5 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Smarcc2Q6PDG5 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Smarcc2Q6PDG5 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Smarcc2Q6PDG5 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc2Q6PDG5 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
Smarcc2Q6PDG5 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Smarcc2Q6PDG5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.63■□□□□ 0.57
Smarcc2Q6PDG5 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc2Q6PDG5 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Smarcc2Q6PDG5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.63■□□□□ 0.57
Smarcc2Q6PDG5 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc2Q6PDG5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.63■□□□□ 0.57
Smarcc2Q6PDG5 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Smarcc2Q6PDG5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc2Q6PDG5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc2Q6PDG5 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc2Q6PDG5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc2Q6PDG5 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Smarcc2Q6PDG5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Smarcc2Q6PDG5 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Smarcc2Q6PDG5 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms