Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShbQ6PD21 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ShbQ6PD21 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShbQ6PD21 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ShbQ6PD21 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShbQ6PD21 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ShbQ6PD21 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ShbQ6PD21 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ShbQ6PD21 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ShbQ6PD21 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.23■□□□□ 0.35
ShbQ6PD21 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.23■□□□□ 0.35
ShbQ6PD21 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShbQ6PD21 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ShbQ6PD21 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.23■□□□□ 0.35
ShbQ6PD21 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ShbQ6PD21 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShbQ6PD21 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.22■□□□□ 0.35
ShbQ6PD21 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShbQ6PD21 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShbQ6PD21 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShbQ6PD21 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
ShbQ6PD21 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.22■□□□□ 0.35
ShbQ6PD21 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC17.22■□□□□ 0.35
ShbQ6PD21 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ShbQ6PD21 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.22■□□□□ 0.35
ShbQ6PD21 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ShbQ6PD21 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ShbQ6PD21 Mir8102-201ENSMUST00000184148 139 ntBASIC17.22■□□□□ 0.35
ShbQ6PD21 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.22■□□□□ 0.35
ShbQ6PD21 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.22■□□□□ 0.35
ShbQ6PD21 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ShbQ6PD21 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.22■□□□□ 0.35
ShbQ6PD21 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
ShbQ6PD21 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShbQ6PD21 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ShbQ6PD21 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ShbQ6PD21 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShbQ6PD21 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShbQ6PD21 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShbQ6PD21 Grk6-207ENSMUST00000225925 2769 ntBASIC17.21■□□□□ 0.35
ShbQ6PD21 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.21■□□□□ 0.35
ShbQ6PD21 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShbQ6PD21 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShbQ6PD21 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.21■□□□□ 0.35
ShbQ6PD21 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ShbQ6PD21 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.21■□□□□ 0.35
ShbQ6PD21 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.21■□□□□ 0.35
ShbQ6PD21 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ShbQ6PD21 Gm38294-201ENSMUST00000192831 381 ntBASIC17.21■□□□□ 0.35
ShbQ6PD21 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.21■□□□□ 0.35
ShbQ6PD21 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShbQ6PD21 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC17.21■□□□□ 0.35
ShbQ6PD21 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShbQ6PD21 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShbQ6PD21 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShbQ6PD21 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.21■□□□□ 0.35
ShbQ6PD21 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShbQ6PD21 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShbQ6PD21 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShbQ6PD21 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ShbQ6PD21 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
ShbQ6PD21 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
ShbQ6PD21 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
ShbQ6PD21 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
ShbQ6PD21 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.2■□□□□ 0.34
ShbQ6PD21 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShbQ6PD21 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShbQ6PD21 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShbQ6PD21 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShbQ6PD21 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShbQ6PD21 Gm6257-201ENSMUST00000163864 910 ntBASIC17.2■□□□□ 0.34
ShbQ6PD21 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
ShbQ6PD21 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ShbQ6PD21 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ShbQ6PD21 Gm2272-201ENSMUST00000194903 582 ntBASIC17.2■□□□□ 0.34
ShbQ6PD21 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShbQ6PD21 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShbQ6PD21 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.2■□□□□ 0.34
ShbQ6PD21 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShbQ6PD21 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShbQ6PD21 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShbQ6PD21 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShbQ6PD21 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShbQ6PD21 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShbQ6PD21 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShbQ6PD21 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ShbQ6PD21 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShbQ6PD21 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShbQ6PD21 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShbQ6PD21 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShbQ6PD21 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShbQ6PD21 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShbQ6PD21 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
ShbQ6PD21 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShbQ6PD21 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ShbQ6PD21 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShbQ6PD21 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShbQ6PD21 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShbQ6PD21 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ShbQ6PD21 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms