Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm44390-201ENSMUST00000197533 144 ntBASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Gm44313-201ENSMUST00000198018 138 ntBASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Gm44486-201ENSMUST00000198508 138 ntBASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Gm44314-201ENSMUST00000199263 138 ntBASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Gm44394-201ENSMUST00000199558 138 ntBASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Gm44484-201ENSMUST00000199873 138 ntBASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Gm44466-201ENSMUST00000200264 138 ntBASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Gm44359-201ENSMUST00000200671 138 ntBASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hmgb4Q6P8W9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Gm18206-201ENSMUST00000207027 926 ntBASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hmgb4Q6P8W9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hmgb4Q6P8W9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Gm7862-201ENSMUST00000121461 292 ntBASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Mir5131-201ENSMUST00000175426 93 ntBASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Gm5867-201ENSMUST00000063197 592 ntBASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hmgb4Q6P8W9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms