Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcf1Q6P542 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.94■□□□□ 0.46
Abcf1Q6P542 Gm27389-201ENSMUST00000183622 195 ntBASIC17.94■□□□□ 0.46
Abcf1Q6P542 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcf1Q6P542 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcf1Q6P542 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.94■□□□□ 0.46
Abcf1Q6P542 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcf1Q6P542 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.94■□□□□ 0.46
Abcf1Q6P542 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.94■□□□□ 0.46
Abcf1Q6P542 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Actl10-202ENSMUST00000226583 1501 ntBASIC17.93■□□□□ 0.46
Abcf1Q6P542 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abcf1Q6P542 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Gm7213-201ENSMUST00000215977 950 ntBASIC17.93■□□□□ 0.46
Abcf1Q6P542 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abcf1Q6P542 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.93■□□□□ 0.46
Abcf1Q6P542 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Abcf1Q6P542 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abcf1Q6P542 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abcf1Q6P542 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Abcf1Q6P542 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abcf1Q6P542 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abcf1Q6P542 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abcf1Q6P542 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Abcf1Q6P542 Mir1668-201ENSMUST00000184114 107 ntBASIC17.91■□□□□ 0.46
Abcf1Q6P542 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.91■□□□□ 0.46
Abcf1Q6P542 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Abcf1Q6P542 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abcf1Q6P542 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Abcf1Q6P542 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abcf1Q6P542 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abcf1Q6P542 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Abcf1Q6P542 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcf1Q6P542 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcf1Q6P542 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Abcf1Q6P542 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcf1Q6P542 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcf1Q6P542 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcf1Q6P542 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Abcf1Q6P542 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcf1Q6P542 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcf1Q6P542 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Abcf1Q6P542 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Abcf1Q6P542 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Abcf1Q6P542 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms