Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Krt39Q6IFX4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Krt39Q6IFX4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Krt39Q6IFX4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Krt39Q6IFX4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Krt39Q6IFX4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Gm7889-201ENSMUST00000185591 958 ntBASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Krt39Q6IFX4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Asic1-205ENSMUST00000228185 1818 ntBASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Krt39Q6IFX4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Krt39Q6IFX4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Krt39Q6IFX4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Krt39Q6IFX4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Krt39Q6IFX4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Krt39Q6IFX4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Krt39Q6IFX4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Krt39Q6IFX4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Krt39Q6IFX4 Gm13836-201ENSMUST00000121159 501 ntBASIC17.71■□□□□ 0.43
Krt39Q6IFX4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Krt39Q6IFX4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Krt39Q6IFX4 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Krt39Q6IFX4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Krt39Q6IFX4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Krt39Q6IFX4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.71■□□□□ 0.43
Krt39Q6IFX4 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.71■□□□□ 0.43
Krt39Q6IFX4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Krt39Q6IFX4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Krt39Q6IFX4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Krt39Q6IFX4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Krt39Q6IFX4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Krt39Q6IFX4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Krt39Q6IFX4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt39Q6IFX4 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Krt39Q6IFX4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Krt39Q6IFX4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.7■□□□□ 0.42
Krt39Q6IFX4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt39Q6IFX4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt39Q6IFX4 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt39Q6IFX4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Krt39Q6IFX4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms