Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.79■□□□□ 0.28
Scube3Q66PY1 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scube3Q66PY1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.78■□□□□ 0.28
Scube3Q66PY1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Gm13323-201ENSMUST00000120245 1151 ntBASIC16.78■□□□□ 0.28
Scube3Q66PY1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Gm25406-201ENSMUST00000157599 105 ntBASIC16.78■□□□□ 0.28
Scube3Q66PY1 Gm27459-201ENSMUST00000184860 107 ntBASIC16.78■□□□□ 0.28
Scube3Q66PY1 Gm43347-201ENSMUST00000200226 580 ntBASIC16.78■□□□□ 0.28
Scube3Q66PY1 Gm7506-201ENSMUST00000207758 815 ntBASIC16.78■□□□□ 0.28
Scube3Q66PY1 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.78■□□□□ 0.28
Scube3Q66PY1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.78■□□□□ 0.28
Scube3Q66PY1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Scube3Q66PY1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scube3Q66PY1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Scube3Q66PY1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Gm7461-201ENSMUST00000058918 827 ntBASIC16.77■□□□□ 0.28
Scube3Q66PY1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scube3Q66PY1 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scube3Q66PY1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scube3Q66PY1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Scube3Q66PY1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scube3Q66PY1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scube3Q66PY1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.76■□□□□ 0.27
Scube3Q66PY1 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Scube3Q66PY1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.76■□□□□ 0.27
Scube3Q66PY1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scube3Q66PY1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms