Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.67■□□□□ 0.1
Six3Q62233 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.67■□□□□ 0.1
Six3Q62233 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.67■□□□□ 0.1
Six3Q62233 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.67■□□□□ 0.1
Six3Q62233 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.67■□□□□ 0.1
Six3Q62233 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Six3Q62233 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.67■□□□□ 0.1
Six3Q62233 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six3Q62233 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.66■□□□□ 0.1
Six3Q62233 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Six3Q62233 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Six3Q62233 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Six3Q62233 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Six3Q62233 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.66■□□□□ 0.1
Six3Q62233 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.66■□□□□ 0.1
Six3Q62233 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.66■□□□□ 0.1
Six3Q62233 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Six3Q62233 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six3Q62233 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.65■□□□□ 0.1
Six3Q62233 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Six3Q62233 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.65■□□□□ 0.1
Six3Q62233 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.65■□□□□ 0.1
Six3Q62233 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Six3Q62233 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Six3Q62233 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six3Q62233 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Six3Q62233 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Six3Q62233 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Six3Q62233 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six3Q62233 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six3Q62233 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six3Q62233 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Six3Q62233 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Six3Q62233 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Six3Q62233 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Six3Q62233 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six3Q62233 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six3Q62233 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six3Q62233 Gm9987-201ENSMUST00000069768 567 ntBASIC15.64■□□□□ 0.09
Six3Q62233 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Six3Q62233 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms