Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Six1Q62231 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.42■□□□□ 0.22
Six1Q62231 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.42■□□□□ 0.22
Six1Q62231 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Six1Q62231 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Six1Q62231 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.42■□□□□ 0.22
Six1Q62231 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Six1Q62231 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Six1Q62231 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Six1Q62231 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Six1Q62231 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Six1Q62231 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.42■□□□□ 0.22
Six1Q62231 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Six1Q62231 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.41■□□□□ 0.22
Six1Q62231 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 Mir770-201ENSMUST00000103252 94 ntBASIC16.41■□□□□ 0.22
Six1Q62231 Gm6433-201ENSMUST00000118634 875 ntBASIC16.41■□□□□ 0.22
Six1Q62231 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.41■□□□□ 0.22
Six1Q62231 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Six1Q62231 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Six1Q62231 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Six1Q62231 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.41■□□□□ 0.22
Six1Q62231 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.41■□□□□ 0.22
Six1Q62231 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Six1Q62231 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Six1Q62231 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.4■□□□□ 0.22
Six1Q62231 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Six1Q62231 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Six1Q62231 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Six1Q62231 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Six1Q62231 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Six1Q62231 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six1Q62231 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six1Q62231 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six1Q62231 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six1Q62231 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six1Q62231 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Six1Q62231 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.39■□□□□ 0.21
Six1Q62231 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Six1Q62231 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.39■□□□□ 0.21
Six1Q62231 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Six1Q62231 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six1Q62231 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Six1Q62231 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Six1Q62231 Gm18101-201ENSMUST00000215769 548 ntBASIC16.39■□□□□ 0.21
Six1Q62231 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six1Q62231 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six1Q62231 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six1Q62231 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six1Q62231 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six1Q62231 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms