Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.29□□□□□ -0.44
Notch3Q61982 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.29□□□□□ -0.44
Notch3Q61982 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Gm6736-201ENSMUST00000166583 948 ntBASIC12.29□□□□□ -0.44
Notch3Q61982 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.29□□□□□ -0.44
Notch3Q61982 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.29□□□□□ -0.44
Notch3Q61982 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Notch3Q61982 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Notch3Q61982 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Notch3Q61982 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Notch3Q61982 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Notch3Q61982 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Notch3Q61982 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Notch3Q61982 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Notch3Q61982 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Notch3Q61982 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.28□□□□□ -0.44
Notch3Q61982 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Notch3Q61982 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Notch3Q61982 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Notch3Q61982 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Notch3Q61982 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Notch3Q61982 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Notch3Q61982 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Notch3Q61982 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Notch3Q61982 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Notch3Q61982 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Notch3Q61982 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.28□□□□□ -0.44
Notch3Q61982 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Notch3Q61982 Gm15165-201ENSMUST00000118140 502 ntBASIC12.28□□□□□ -0.44
Notch3Q61982 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.28□□□□□ -0.44
Notch3Q61982 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.28□□□□□ -0.44
Notch3Q61982 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Notch3Q61982 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.28□□□□□ -0.44
Notch3Q61982 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Notch3Q61982 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.28□□□□□ -0.44
Notch3Q61982 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Notch3Q61982 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.27□□□□□ -0.44
Notch3Q61982 Gm6598-201ENSMUST00000202719 2615 ntBASIC12.27□□□□□ -0.44
Notch3Q61982 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Notch3Q61982 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Notch3Q61982 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Notch3Q61982 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.27□□□□□ -0.44
Notch3Q61982 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Notch3Q61982 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.27□□□□□ -0.44
Notch3Q61982 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Notch3Q61982 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Notch3Q61982 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Notch3Q61982 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Notch3Q61982 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Notch3Q61982 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Notch3Q61982 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Notch3Q61982 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Notch3Q61982 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Notch3Q61982 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Notch3Q61982 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Notch3Q61982 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Notch3Q61982 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Notch3Q61982 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Notch3Q61982 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Notch3Q61982 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Notch3Q61982 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Notch3Q61982 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Notch3Q61982 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Notch3Q61982 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.27□□□□□ -0.45
Notch3Q61982 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Notch3Q61982 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.27□□□□□ -0.45
Notch3Q61982 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.27□□□□□ -0.45
Notch3Q61982 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.27□□□□□ -0.45
Notch3Q61982 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.27□□□□□ -0.45
Notch3Q61982 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Notch3Q61982 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Notch3Q61982 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Notch3Q61982 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Notch3Q61982 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Notch3Q61982 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms