Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.07■□□□□ 0
Sox17Q61473 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sox17Q61473 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Trmt13-210ENSMUST00000198454 880 ntBASIC15.07■□□□□ 0
Sox17Q61473 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.07■□□□□ 0
Sox17Q61473 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.07■□□□□ 0
Sox17Q61473 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.07■□□□□ 0
Sox17Q61473 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.06■□□□□ 0
Sox17Q61473 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sox17Q61473 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox17Q61473 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox17Q61473 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox17Q61473 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox17Q61473 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.06■□□□□ 0
Sox17Q61473 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox17Q61473 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Sox17Q61473 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox17Q61473 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sox17Q61473 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Sox17Q61473 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Sox17Q61473 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.06■□□□□ 0
Sox17Q61473 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.06■□□□□ 0
Sox17Q61473 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox17Q61473 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox17Q61473 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Sox17Q61473 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox17Q61473 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.06■□□□□ 0
Sox17Q61473 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox17Q61473 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.06■□□□□ 0
Sox17Q61473 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.06■□□□□ 0
Sox17Q61473 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Sox17Q61473 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox17Q61473 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
Sox17Q61473 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox17Q61473 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Sox17Q61473 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.05■□□□□ 0
Sox17Q61473 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox17Q61473 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Sox17Q61473 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Sox17Q61473 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Sox17Q61473 Gm13186-201ENSMUST00000118031 316 ntBASIC15.05■□□□□ -0
Sox17Q61473 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.05■□□□□ -0
Sox17Q61473 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.05■□□□□ -0
Sox17Q61473 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Sox17Q61473 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sox17Q61473 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sox17Q61473 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Sox17Q61473 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox17Q61473 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox17Q61473 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox17Q61473 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.04■□□□□ -0
Sox17Q61473 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox17Q61473 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.04■□□□□ -0
Sox17Q61473 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Sox17Q61473 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox17Q61473 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sox17Q61473 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox17Q61473 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox17Q61473 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox17Q61473 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox17Q61473 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sox17Q61473 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
Sox17Q61473 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.04■□□□□ -0
Sox17Q61473 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox17Q61473 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sox17Q61473 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms