Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Gm42545-201ENSMUST00000202755 922 ntBASIC19.24■□□□□ 0.67
Mre11Q61216 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.24■□□□□ 0.67
Mre11Q61216 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mre11Q61216 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mre11Q61216 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mre11Q61216 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Mre11Q61216 Actl10-202ENSMUST00000226583 1501 ntBASIC19.24■□□□□ 0.67
Mre11Q61216 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Mre11Q61216 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mre11Q61216 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mre11Q61216 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mre11Q61216 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.23■□□□□ 0.67
Mre11Q61216 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.23■□□□□ 0.67
Mre11Q61216 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.23■□□□□ 0.67
Mre11Q61216 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Mre11Q61216 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Mre11Q61216 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Mre11Q61216 Gm45546-201ENSMUST00000211053 2394 ntBASIC19.22■□□□□ 0.67
Mre11Q61216 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Mre11Q61216 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Mre11Q61216 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Mre11Q61216 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC19.22■□□□□ 0.67
Mre11Q61216 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.22■□□□□ 0.67
Mre11Q61216 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mre11Q61216 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.22■□□□□ 0.67
Mre11Q61216 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC19.21■□□□□ 0.67
Mre11Q61216 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Mre11Q61216 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Mre11Q61216 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Mre11Q61216 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mre11Q61216 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC19.21■□□□□ 0.66
Mre11Q61216 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Mre11Q61216 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mre11Q61216 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mre11Q61216 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mre11Q61216 Sybu-209ENSMUST00000228639 4113 ntBASIC19.2■□□□□ 0.66
Mre11Q61216 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mre11Q61216 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.2■□□□□ 0.66
Mre11Q61216 Gm9731-201ENSMUST00000209480 747 ntBASIC19.2■□□□□ 0.66
Mre11Q61216 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mre11Q61216 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC19.2■□□□□ 0.66
Mre11Q61216 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mre11Q61216 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mre11Q61216 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.2■□□□□ 0.66
Mre11Q61216 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mre11Q61216 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mre11Q61216 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mre11Q61216 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mre11Q61216 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mre11Q61216 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms