Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Gm13365-201ENSMUST00000121188 973 ntBASIC13.37□□□□□ -0.27
Hcfc1Q61191 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.37□□□□□ -0.27
Hcfc1Q61191 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hcfc1Q61191 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcfc1Q61191 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Hcfc1Q61191 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.37□□□□□ -0.27
Hcfc1Q61191 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Hcfc1Q61191 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Hcfc1Q61191 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.37□□□□□ -0.27
Hcfc1Q61191 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcfc1Q61191 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcfc1Q61191 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hcfc1Q61191 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcfc1Q61191 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Hcfc1Q61191 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.36□□□□□ -0.27
Hcfc1Q61191 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcfc1Q61191 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hcfc1Q61191 Gm9385-201ENSMUST00000117563 472 ntBASIC13.36□□□□□ -0.27
Hcfc1Q61191 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hcfc1Q61191 Gm23547-201ENSMUST00000158210 271 ntBASIC13.36□□□□□ -0.27
Hcfc1Q61191 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.36□□□□□ -0.27
Hcfc1Q61191 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.36□□□□□ -0.27
Hcfc1Q61191 Thap2-203ENSMUST00000218989 527 ntBASIC13.36□□□□□ -0.27
Hcfc1Q61191 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcfc1Q61191 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcfc1Q61191 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcfc1Q61191 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hcfc1Q61191 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Hcfc1Q61191 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.36□□□□□ -0.27
Hcfc1Q61191 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcfc1Q61191 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hcfc1Q61191 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hcfc1Q61191 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hcfc1Q61191 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcfc1Q61191 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcfc1Q61191 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcfc1Q61191 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hcfc1Q61191 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcfc1Q61191 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcfc1Q61191 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcfc1Q61191 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hcfc1Q61191 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcfc1Q61191 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Hcfc1Q61191 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Hcfc1Q61191 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.35□□□□□ -0.27
Hcfc1Q61191 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hcfc1Q61191 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.35□□□□□ -0.27
Hcfc1Q61191 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcfc1Q61191 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcfc1Q61191 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hcfc1Q61191 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hcfc1Q61191 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.34□□□□□ -0.27
Hcfc1Q61191 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.34□□□□□ -0.27
Hcfc1Q61191 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Gm27622-201ENSMUST00000183779 60 ntBASIC13.34□□□□□ -0.27
Hcfc1Q61191 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.34□□□□□ -0.27
Hcfc1Q61191 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.34□□□□□ -0.27
Hcfc1Q61191 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Rpph1-201ENSMUST00000175096 319 ntBASIC13.34□□□□□ -0.27
Hcfc1Q61191 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.34□□□□□ -0.27
Hcfc1Q61191 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hcfc1Q61191 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
Hcfc1Q61191 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hcfc1Q61191 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Hcfc1Q61191 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Hcfc1Q61191 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Hcfc1Q61191 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hcfc1Q61191 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hcfc1Q61191 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcfc1Q61191 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcfc1Q61191 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hcfc1Q61191 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcfc1Q61191 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hcfc1Q61191 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms