Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sdf4Q61112 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Sdf4Q61112 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sdf4Q61112 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sdf4Q61112 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sdf4Q61112 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sdf4Q61112 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sdf4Q61112 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.25■□□□□ 0.19
Sdf4Q61112 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sdf4Q61112 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.25■□□□□ 0.19
Sdf4Q61112 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sdf4Q61112 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Sdf4Q61112 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdf4Q61112 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Sdf4Q61112 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Sdf4Q61112 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Sdf4Q61112 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sdf4Q61112 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sdf4Q61112 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdf4Q61112 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdf4Q61112 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.24■□□□□ 0.19
Sdf4Q61112 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sdf4Q61112 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.24■□□□□ 0.19
Sdf4Q61112 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sdf4Q61112 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdf4Q61112 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdf4Q61112 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.24■□□□□ 0.19
Sdf4Q61112 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdf4Q61112 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdf4Q61112 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Sdf4Q61112 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdf4Q61112 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdf4Q61112 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sdf4Q61112 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdf4Q61112 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Sdf4Q61112 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdf4Q61112 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdf4Q61112 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdf4Q61112 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sdf4Q61112 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdf4Q61112 Rprl3-201ENSMUST00000157400 290 ntBASIC16.23■□□□□ 0.19
Sdf4Q61112 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sdf4Q61112 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sdf4Q61112 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdf4Q61112 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdf4Q61112 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdf4Q61112 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdf4Q61112 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdf4Q61112 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdf4Q61112 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdf4Q61112 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sdf4Q61112 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sdf4Q61112 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdf4Q61112 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sdf4Q61112 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Sdf4Q61112 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Sdf4Q61112 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Sdf4Q61112 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdf4Q61112 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Sdf4Q61112 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.22■□□□□ 0.19
Sdf4Q61112 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.22■□□□□ 0.19
Sdf4Q61112 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdf4Q61112 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdf4Q61112 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdf4Q61112 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Sdf4Q61112 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdf4Q61112 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.22■□□□□ 0.19
Sdf4Q61112 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sdf4Q61112 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sdf4Q61112 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Sdf4Q61112 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sdf4Q61112 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdf4Q61112 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Sdf4Q61112 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdf4Q61112 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdf4Q61112 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdf4Q61112 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdf4Q61112 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.21■□□□□ 0.19
Sdf4Q61112 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdf4Q61112 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sdf4Q61112 Olfr129-201ENSMUST00000122318 993 ntBASIC16.21■□□□□ 0.19
Sdf4Q61112 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.21■□□□□ 0.19
Sdf4Q61112 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.21■□□□□ 0.19
Sdf4Q61112 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdf4Q61112 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdf4Q61112 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Sdf4Q61112 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdf4Q61112 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdf4Q61112 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdf4Q61112 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.21■□□□□ 0.19
Sdf4Q61112 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdf4Q61112 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Sdf4Q61112 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Sdf4Q61112 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Sdf4Q61112 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sdf4Q61112 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms