Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vmn1r223Q5SSA0 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vmn1r223Q5SSA0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmn1r223Q5SSA0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmn1r223Q5SSA0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmn1r223Q5SSA0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmn1r223Q5SSA0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Vmn1r223Q5SSA0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmn1r223Q5SSA0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmn1r223Q5SSA0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmn1r223Q5SSA0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmn1r223Q5SSA0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmn1r223Q5SSA0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmn1r223Q5SSA0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmn1r223Q5SSA0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vmn1r223Q5SSA0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Gm10231-201ENSMUST00000181584 441 ntBASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Gm45058-201ENSMUST00000205810 766 ntBASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Gm10175-202ENSMUST00000208752 441 ntBASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vmn1r223Q5SSA0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Gm16061-201ENSMUST00000122167 857 ntBASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Gm13474-201ENSMUST00000122466 815 ntBASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Phf7-203ENSMUST00000226565 1971 ntBASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vmn1r223Q5SSA0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Vmn1r223Q5SSA0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms