Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav2Q5R1I9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Gm12497-201ENSMUST00000138778 237 ntBASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Gm6376-201ENSMUST00000209407 580 ntBASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav2Q5R1I9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Gm44771-201ENSMUST00000206975 626 ntBASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Gm9172-201ENSMUST00000212092 954 ntBASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav2Q5R1I9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Trav2Q5R1I9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms