Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trav7d-4Q5R1H9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav7d-4Q5R1H9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trav7d-4Q5R1H9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav7d-4Q5R1H9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav7d-4Q5R1H9 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.27□□□□□ -0.45
Trav7d-4Q5R1H9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Trav7d-4Q5R1H9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav7d-4Q5R1H9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Gm37025-201ENSMUST00000195159 829 ntBASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav7d-4Q5R1H9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Gm7290-201ENSMUST00000104990 617 ntBASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Gm12918-201ENSMUST00000120234 636 ntBASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Gm15710-201ENSMUST00000121821 636 ntBASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Gm5075-201ENSMUST00000196916 622 ntBASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Gm2011-201ENSMUST00000203124 1263 ntBASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav7d-4Q5R1H9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav7d-4Q5R1H9 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms