Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav8d-1Q5R1H8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 App-207ENSMUST00000227737 2827 ntBASIC13.17□□□□□ -0.3
Trav8d-1Q5R1H8 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav8d-1Q5R1H8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Gm5417-201ENSMUST00000079706 384 ntBASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav8d-1Q5R1H8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Trav8d-1Q5R1H8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav8d-1Q5R1H8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms