Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Gm37722-201ENSMUST00000193757 208 ntBASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trav6-3Q5R1E6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Gm10052-201ENSMUST00000168019 960 ntBASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Gm7729-201ENSMUST00000050143 801 ntBASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav6-3Q5R1E6 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Gm44430-201ENSMUST00000203376 995 ntBASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Gm21559-201ENSMUST00000220638 855 ntBASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Gm8587-201ENSMUST00000076538 843 ntBASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav6-3Q5R1E6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-3Q5R1E6 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-3Q5R1E6 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav6-3Q5R1E6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav6-3Q5R1E6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms