Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm12085-201ENSMUST00000119263 940 ntBASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm37179-201ENSMUST00000194862 823 ntBASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 App-207ENSMUST00000227737 2827 ntBASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm13186-201ENSMUST00000118031 316 ntBASIC12.47□□□□□ -0.41
Trav15-1-dv6-1Q5R1D2 Gm15378-201ENSMUST00000121894 207 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms