Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Flg-201ENSMUST00000050758 1488 ntBASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav3-3Q5R1C3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Gm2399-201ENSMUST00000104944 225 ntBASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav3-3Q5R1C3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Gm6211-202ENSMUST00000167849 925 ntBASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav3-3Q5R1C3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav3-3Q5R1C3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms